Beginning Perl for Bioinformatics

Author: James Tisdall
Edition: 1
Publisher: O'Reilly Media
Binding: Paperback
ISBN: 0596000804
Category: Programming
List Price: $ 39.95
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Beginning Perl for Bioinformatics

With its highly developed capacity to detect patterns in data, Perl has become one of the most popular languages for biological data analysis. Programming books Beginning Perl for Bioinformatics pdf. But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Download books Beginning Perl for Bioinformatics by James Tisdall pdf via mediafire, 4shared, rapidshare.

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Mastering Perl for Bioinformatics covers the core Perl language and many of its module extensions, presenting them in the context of biological data and problems of pressing interest to the biological community. This book, along with Beginning Perl for Bioinformatics, forms a basic course in Perl programming. This second volume finishes the basic Perl tutorial material (references, complex data structures, object-oriented programming, use of modules--all presented in a biological context) and pr

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Beginning Perl for Bioinformatics : Paperback : O'Reilly Media, Inc, USA : 9780596000806 : 0596000804 : 01 Jan 2002 : This text is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem.

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payment | shipping rates | returns Beginning Perl for Bioinformatics Product Category :Books UPC :636920000808 ISBN :0596000804 Title :Beginning Perl for Bioinformatics EAN :9780596000806 Authors :James Tisdall Binding :Paperback Publisher :O'Reilly Media Publication Date :2001-10-15 Pages :400 Signed :False First Edition :False Dust Jacket :False List Price (MSRP) :39.95 Height :0.9400 inches Width :7.0100 inches Length :9.0600 inches Weight :1.3700 pounds Keywords :General, Perl, Linux, Opera

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Categories: Perl (Computer program language), Bioinformatics. Contributors: James D. Tisdall - Author. Format: Paperback

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Categories: Bioinformatics, Perl (Computer program language). Contributors: James Tisdall - Author. Format: NOOK Book

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Download Beginning Perl for Bioinformatics

But if you're a biologist with little or no programming experience, starting out in Perl can be a challenge. Many biologists have a difficult time learning how to apply the language to bioinformatics. The most popular Perl programming books are often too theoretical and too focused on computer science for a non-programming biologist who needs to solve very specific problems.Beginning Perl for Bioinformatics is designed to get you quickly over the Perl language barrier by approaching programming as an important new laboratory skill, revealing Perl programs and techniques that are immediately useful in the lab. Each chapter focuses on solving a particular bioinformatics problem or class of problems, starting with the simplest and increasing in complexity as the book progresses. Each chapter includes programming exercises and teaches bioinformatics by showing and modifying programs that deal with various kinds of practical biological problems. By the end of the book you'll have a solid understanding of Perl basics, a collection of programs for such tasks as parsing BLAST and GenBank, and the skills to take on more advanced bioinformatics programming. Some of the later chapters focus in greater detail on specific bioinformatics topics. This book is suitable for use as a classroom textbook, for self-study, and as a reference.The book covers:Programming basics and working with DNA sequences and strings Debugging your code Simulating gene mutations using random number generators Regular expressions and finding motifs in data Arrays, hashes, and relational databases Regular expressions and restriction maps Using Perl to parse PDB records, annotations in GenBank, and BLAST output Biology, it seems, is a good showcase for the talents of Perl. Newcomers to Perl who understand biological information will find James Tisdall's Beginning Perl for Bioinformatics to be an excellent compendium of examples. Teachers of Perl will likewise find the text to be filled with fresh programming illustrations of growing scientific importance. Seasoned Perlmongers who want to learn biology, however, should search elsewhere, as Tisdall's emphasis is on Perl's logic rather than Mother Nature's. Departing from O'Reilly's earlier monograph Developing Bioinformatic Computer Skills, Tisdall's text is organized aggressively along didactic lines. Nearly all of the 13 chapters begin with twin bullet lists of Perl programming tools and the bioinformatic methods that require them. Likewise, the chapters end with exercises. String concatenation is illustrated with gene splicing, and regular expressions are taught with gene transcription and motif searching. Tisdall emphasizes sequence examples throughout, leading up to an introduction to a Perl interface for the NIH GenBank biological database and the widely used BLAST sequence alignment tool. Download free Beginning Perl for Bioinformatics pdf